Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.11■□□□□ 0.33
Gtf3c5Q8R2T8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Gm13464-201ENSMUST00000119418 935 ntBASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Gtf3c5Q8R2T8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm25287-201ENSMUST00000103846 110 ntBASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm22918-201ENSMUST00000103855 110 ntBASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm6973-201ENSMUST00000117080 721 ntBASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm20553-201ENSMUST00000204205 844 ntBASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm9182-201ENSMUST00000217829 639 ntBASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf3c5Q8R2T8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gtf3c5Q8R2T8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Gm27702-201ENSMUST00000184512 56 ntBASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c5Q8R2T8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms