Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 REEP4-207ENST00000523293 913 ntTSL 3 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 API5-211ENST00000534695 560 ntTSL 5 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 AC008267.7-201ENST00000624570 1194 ntBASIC25.87■■□□□ 1.73
RAPGEF3O95398 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC25.87■■□□□ 1.73
RAPGEF3O95398 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAPGEF3O95398 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 AC027307.2-201ENST00000591252 911 ntBASIC25.86■■□□□ 1.73
RAPGEF3O95398 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 AL138828.2-201ENST00000615812 383 ntBASIC25.86■■□□□ 1.73
RAPGEF3O95398 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RAPGEF3O95398 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RAPGEF3O95398 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF3O95398 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 AC109635.5-201ENST00000533593 962 ntBASIC25.85■■□□□ 1.73
RAPGEF3O95398 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF3O95398 AC017083.2-201ENST00000608069 979 ntBASIC25.85■■□□□ 1.73
RAPGEF3O95398 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC25.85■■□□□ 1.73
RAPGEF3O95398 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RAPGEF3O95398 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 WASH6P-202ENST00000359512 1437 ntBASIC25.84■■□□□ 1.73
RAPGEF3O95398 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 HNRNPA3P1-201ENST00000401429 1139 ntBASIC25.84■■□□□ 1.73
RAPGEF3O95398 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RAPGEF3O95398 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 HNRNPA3P5-201ENST00000455201 833 ntBASIC25.84■■□□□ 1.73
RAPGEF3O95398 ARL16-202ENST00000570561 768 ntTSL 2 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 AC046185.3-201ENST00000623228 1824 ntBASIC25.84■■□□□ 1.73
RAPGEF3O95398 AMT-250ENST00000637682 1823 ntTSL 5 BASIC25.84■■□□□ 1.73
RAPGEF3O95398 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 MPI-209ENST00000564003 1195 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 GPER1-207ENST00000619052 571 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC25.83■■□□□ 1.73
RAPGEF3O95398 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAPGEF3O95398 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
RAPGEF3O95398 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
RAPGEF3O95398 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.83■■□□□ 1.72
RAPGEF3O95398 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
RAPGEF3O95398 AL031598.1-201ENST00000561511 1773 ntBASIC25.82■■□□□ 1.72
RAPGEF3O95398 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms