Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.45■□□□□ 0.06
Kcnu1O54982 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Kcnu1O54982 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.45■□□□□ 0.06
Kcnu1O54982 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.45■□□□□ 0.06
Kcnu1O54982 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Kcnu1O54982 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.44■□□□□ 0.06
Kcnu1O54982 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Kcnu1O54982 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Kcnu1O54982 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Kcnu1O54982 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Gm27920-201ENSMUST00000183953 96 ntBASIC15.44■□□□□ 0.06
Kcnu1O54982 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Gm9182-201ENSMUST00000217829 639 ntBASIC15.44■□□□□ 0.06
Kcnu1O54982 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Kcnu1O54982 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Kcnu1O54982 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Kcnu1O54982 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Gm11779-201ENSMUST00000118541 368 ntBASIC15.43■□□□□ 0.06
Kcnu1O54982 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Mir3113-201ENSMUST00000175478 76 ntBASIC15.43■□□□□ 0.06
Kcnu1O54982 Gm18206-201ENSMUST00000207027 926 ntBASIC15.43■□□□□ 0.06
Kcnu1O54982 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.43■□□□□ 0.06
Kcnu1O54982 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Kcnu1O54982 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.43■□□□□ 0.06
Kcnu1O54982 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.42■□□□□ 0.06
Kcnu1O54982 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Kcnu1O54982 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Kcnu1O54982 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Mir8117-201ENSMUST00000184773 107 ntBASIC15.42■□□□□ 0.06
Kcnu1O54982 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Kcnu1O54982 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.42■□□□□ 0.06
Kcnu1O54982 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.42■□□□□ 0.06
Kcnu1O54982 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.42■□□□□ 0.06
Kcnu1O54982 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Kcnu1O54982 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms