Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMG20BQ9P0W2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMG20BQ9P0W2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.29■■□□□ 1
HMG20BQ9P0W2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HMG20BQ9P0W2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.29■■□□□ 1
HMG20BQ9P0W2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.29■■□□□ 1
HMG20BQ9P0W2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 MIR574-201ENST00000385209 96 ntBASIC21.28■■□□□ 1
HMG20BQ9P0W2 KRT18P27-201ENST00000427733 1299 ntBASIC21.28■■□□□ 1
HMG20BQ9P0W2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 AC106730.1-201ENST00000566722 1090 ntBASIC21.28■■□□□ 1
HMG20BQ9P0W2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
HMG20BQ9P0W2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMG20BQ9P0W2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 AC073621.1-201ENST00000392730 636 ntBASIC21.27■■□□□ 1
HMG20BQ9P0W2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 STK19B-204ENST00000512515 211 ntBASIC21.27■■□□□ 1
HMG20BQ9P0W2 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.27■■□□□ 1
HMG20BQ9P0W2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HMG20BQ9P0W2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
HMG20BQ9P0W2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.27■□□□□ 0.99
HMG20BQ9P0W2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
HMG20BQ9P0W2 AC009336.1-201ENST00000608941 1553 ntBASIC21.27■□□□□ 0.99
HMG20BQ9P0W2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HMG20BQ9P0W2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AC133963.1-201ENST00000504166 1679 ntBASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SIGLEC30P-201ENST00000455569 941 ntBASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 AL355312.1-201ENST00000407115 2176 ntBASIC21.26■□□□□ 0.99
HMG20BQ9P0W2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 LINC00304-203ENST00000565008 1864 ntBASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 AL589182.2-201ENST00000619332 1049 ntBASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.25■□□□□ 0.99
HMG20BQ9P0W2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms