Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Gm13823-201ENSMUST00000119930 345 ntBASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Gm24158-201ENSMUST00000175263 71 ntBASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Gm18766-201ENSMUST00000189811 808 ntBASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3aQ9JKX8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Gm10253-201ENSMUST00000194270 940 ntBASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk3aQ9JKX8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk3aQ9JKX8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms