Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q8CD60 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.29■□□□□ 0.04
Q8CD60 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.29■□□□□ 0.04
Q8CD60 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.29■□□□□ 0.04
Q8CD60 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Gm43125-201ENSMUST00000201724 730 ntBASIC15.29■□□□□ 0.04
Q8CD60 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
Q8CD60 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Q8CD60 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.29■□□□□ 0.04
Q8CD60 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q8CD60 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q8CD60 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.28■□□□□ 0.04
Q8CD60 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.28■□□□□ 0.04
Q8CD60 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Gm23547-201ENSMUST00000158210 271 ntBASIC15.28■□□□□ 0.04
Q8CD60 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.28■□□□□ 0.04
Q8CD60 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.28■□□□□ 0.04
Q8CD60 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.28■□□□□ 0.04
Q8CD60 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.28■□□□□ 0.04
Q8CD60 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.28■□□□□ 0.04
Q8CD60 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Q8CD60 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q8CD60 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Q8CD60 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
Q8CD60 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Q8CD60 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Q8CD60 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q8CD60 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
Q8CD60 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Gm43474-201ENSMUST00000196415 774 ntBASIC15.27■□□□□ 0.04
Q8CD60 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Gm9182-201ENSMUST00000217829 639 ntBASIC15.27■□□□□ 0.04
Q8CD60 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.27■□□□□ 0.04
Q8CD60 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q8CD60 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Q8CD60 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q8CD60 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q8CD60 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms