Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 AC103564.2-201ENST00000432853 1299 ntBASIC19.72■□□□□ 0.75
SHC4Q6S5L8 BX276092.5-203ENST00000456199 560 ntBASIC19.72■□□□□ 0.75
SHC4Q6S5L8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 AL121672.3-201ENST00000608644 468 ntBASIC19.72■□□□□ 0.75
SHC4Q6S5L8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHC4Q6S5L8 HTR7P1-202ENST00000624664 4411 ntBASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AC005915.1-201ENST00000624912 2018 ntBASIC19.71■□□□□ 0.75
SHC4Q6S5L8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AP002383.4-201ENST00000442518 975 ntBASIC19.71■□□□□ 0.75
SHC4Q6S5L8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.71■□□□□ 0.75
SHC4Q6S5L8 AC105020.1-201ENST00000435356 2205 ntBASIC19.71■□□□□ 0.75
SHC4Q6S5L8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHC4Q6S5L8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 AC011467.2-201ENST00000598425 242 ntBASIC19.7■□□□□ 0.74
SHC4Q6S5L8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.7■□□□□ 0.74
SHC4Q6S5L8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC4Q6S5L8 AC132938.5-201ENST00000624980 1813 ntBASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms