Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox17Q61473 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.66□□□□□ -0.22
Sox17Q61473 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.66□□□□□ -0.22
Sox17Q61473 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox17Q61473 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox17Q61473 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox17Q61473 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Sox17Q61473 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sox17Q61473 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox17Q61473 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox17Q61473 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox17Q61473 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox17Q61473 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.65□□□□□ -0.22
Sox17Q61473 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sox17Q61473 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Sox17Q61473 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox17Q61473 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sox17Q61473 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sox17Q61473 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox17Q61473 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sox17Q61473 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Sox17Q61473 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sox17Q61473 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox17Q61473 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox17Q61473 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox17Q61473 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox17Q61473 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.64□□□□□ -0.23
Sox17Q61473 Gm6659-201ENSMUST00000174752 547 ntBASIC13.64□□□□□ -0.23
Sox17Q61473 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox17Q61473 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sox17Q61473 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox17Q61473 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox17Q61473 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Sox17Q61473 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.63□□□□□ -0.23
Sox17Q61473 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.63□□□□□ -0.23
Sox17Q61473 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms