Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 ZNF444P1-201ENST00000559497 298 ntBASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 NTF6B-201ENST00000591913 560 ntBASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 PKD1P5-201ENST00000532415 10291 ntBASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AC093010.1-201ENST00000473625 1624 ntBASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 LINC01126-201ENST00000623515 1646 ntBASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AL136038.3-201ENST00000561909 1096 ntBASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AL121956.5-201ENST00000625261 221 ntBASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATPAF1Q5TC12 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AC008894.3-201ENST00000624324 3103 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 PCDHB19P-201ENST00000570871 2371 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AL513477.1-201ENST00000602865 2407 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 KRT18P48-201ENST00000434763 852 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 AC083849.1-201ENST00000615227 514 ntBASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ATPAF1Q5TC12 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms