Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3P56703 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 GUSBP12-201ENST00000513727 720 ntBASIC16.54■□□□□ 0.24
WNT3P56703 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3P56703 AC109462.3-201ENST00000573934 613 ntBASIC16.54■□□□□ 0.24
WNT3P56703 AL138831.2-201ENST00000606564 490 ntBASIC16.54■□□□□ 0.24
WNT3P56703 NPAP1P7-201ENST00000613027 823 ntBASIC16.54■□□□□ 0.24
WNT3P56703 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3P56703 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3P56703 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
WNT3P56703 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 HTR7P1-202ENST00000624664 4411 ntBASIC16.54■□□□□ 0.24
WNT3P56703 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3P56703 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 AC093525.9-201ENST00000624961 1746 ntBASIC16.53■□□□□ 0.24
WNT3P56703 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 AC092053.1-201ENST00000605787 1936 ntBASIC16.53■□□□□ 0.24
WNT3P56703 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 AL049757.1-201ENST00000616842 1596 ntBASIC16.53■□□□□ 0.24
WNT3P56703 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
WNT3P56703 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.53■□□□□ 0.24
WNT3P56703 TSPY22P-201ENST00000427496 604 ntBASIC16.53■□□□□ 0.24
WNT3P56703 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.53■□□□□ 0.24
WNT3P56703 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 KRT126P-201ENST00000549467 1181 ntBASIC16.53■□□□□ 0.24
WNT3P56703 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.53■□□□□ 0.24
WNT3P56703 AL592071.1-201ENST00000611956 408 ntBASIC16.53■□□□□ 0.24
WNT3P56703 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
WNT3P56703 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3P56703 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3P56703 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3P56703 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
WNT3P56703 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
WNT3P56703 AC016734.2-201ENST00000624325 1377 ntBASIC16.52■□□□□ 0.24
WNT3P56703 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3P56703 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
WNT3P56703 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.52■□□□□ 0.24
WNT3P56703 ATP5G2P1-201ENST00000433580 426 ntBASIC16.52■□□□□ 0.24
WNT3P56703 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.52■□□□□ 0.24
WNT3P56703 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
WNT3P56703 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.52■□□□□ 0.24
WNT3P56703 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
WNT3P56703 AC124864.1-201ENST00000623408 392 ntBASIC16.52■□□□□ 0.24
WNT3P56703 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms