Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CtskP55097 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CtskP55097 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.31□□□□□ -0.12
CtskP55097 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.31□□□□□ -0.12
CtskP55097 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CtskP55097 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtskP55097 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Gm12428-201ENSMUST00000119844 727 ntBASIC14.3□□□□□ -0.12
CtskP55097 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Gm27306-201ENSMUST00000183970 107 ntBASIC14.3□□□□□ -0.12
CtskP55097 Mir6977-201ENSMUST00000184960 64 ntBASIC14.3□□□□□ -0.12
CtskP55097 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Gm5186-201ENSMUST00000218781 920 ntBASIC14.3□□□□□ -0.12
CtskP55097 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.3□□□□□ -0.12
CtskP55097 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.3□□□□□ -0.12
CtskP55097 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.3□□□□□ -0.12
CtskP55097 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CtskP55097 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.3□□□□□ -0.12
CtskP55097 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtskP55097 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CtskP55097 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.29□□□□□ -0.12
CtskP55097 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
CtskP55097 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.29□□□□□ -0.12
CtskP55097 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CtskP55097 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtskP55097 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtskP55097 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.28□□□□□ -0.12
CtskP55097 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Gm27920-201ENSMUST00000183953 96 ntBASIC14.28□□□□□ -0.12
CtskP55097 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CtskP55097 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.28□□□□□ -0.12
CtskP55097 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtskP55097 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.28□□□□□ -0.12
CtskP55097 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.28□□□□□ -0.12
CtskP55097 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms