Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Efs-202ENSMUST00000227037 2540 ntBASIC13.92□□□□□ -0.18
Cdh4P39038 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdh4P39038 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cdh4P39038 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdh4P39038 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdh4P39038 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdh4P39038 Gm43474-201ENSMUST00000196415 774 ntBASIC13.92□□□□□ -0.18
Cdh4P39038 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Gm45098-201ENSMUST00000207179 657 ntBASIC13.92□□□□□ -0.18
Cdh4P39038 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.92□□□□□ -0.18
Cdh4P39038 Gm8396-201ENSMUST00000057361 823 ntBASIC13.92□□□□□ -0.18
Cdh4P39038 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdh4P39038 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdh4P39038 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh4P39038 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Cdh4P39038 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdh4P39038 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.91□□□□□ -0.18
Cdh4P39038 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Gm9182-201ENSMUST00000217829 639 ntBASIC13.91□□□□□ -0.18
Cdh4P39038 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdh4P39038 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh4P39038 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.91□□□□□ -0.18
Cdh4P39038 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Cdh4P39038 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.91□□□□□ -0.18
Cdh4P39038 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh4P39038 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdh4P39038 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdh4P39038 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdh4P39038 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh4P39038 Gm25287-201ENSMUST00000103846 110 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Gm22918-201ENSMUST00000103855 110 ntBASIC13.9□□□□□ -0.18
Cdh4P39038 Gm14701-201ENSMUST00000117156 348 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms