Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPNE3O75131 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 AC011270.2-201ENST00000624293 2550 ntBASIC16.82■□□□□ 0.28
CPNE3O75131 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPNE3O75131 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE3O75131 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE3O75131 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE3O75131 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 AL049840.3-201ENST00000602669 611 ntBASIC16.82■□□□□ 0.28
CPNE3O75131 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPNE3O75131 AP000867.4-201ENST00000641616 219 ntBASIC16.82■□□□□ 0.28
CPNE3O75131 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 BICD1-207ENST00000551848 1962 ntBASIC16.82■□□□□ 0.28
CPNE3O75131 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CPNE3O75131 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE3O75131 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE3O75131 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPNE3O75131 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE3O75131 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 RPS2P1-201ENST00000434010 821 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 HNRNPDP1-201ENST00000439535 754 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 SLC25A1P1-201ENST00000528351 927 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 OR7E14P-202ENST00000530490 1290 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE3O75131 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.81■□□□□ 0.28
CPNE3O75131 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.81■□□□□ 0.28
CPNE3O75131 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 AC023511.2-201ENST00000618803 211 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE3O75131 AC067852.2-201ENST00000590513 2313 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE3O75131 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CPNE3O75131 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPNE3O75131 AC010460.3-201ENST00000511359 1579 ntBASIC16.81■□□□□ 0.28
CPNE3O75131 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE3O75131 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE3O75131 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE3O75131 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 AC124067.4-201ENST00000519691 2379 ntBASIC16.8■□□□□ 0.28
CPNE3O75131 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE3O75131 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE3O75131 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE3O75131 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE3O75131 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE3O75131 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE3O75131 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.8■□□□□ 0.28
CPNE3O75131 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE3O75131 HLA-J-201ENST00000462773 1622 ntBASIC16.8■□□□□ 0.28
CPNE3O75131 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms