Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.35■□□□□ 0.85
CTNND1O60716 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.35■□□□□ 0.85
CTNND1O60716 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
CTNND1O60716 AP000344.2-201ENST00000512987 629 ntBASIC20.35■□□□□ 0.85
CTNND1O60716 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 FLJ13224-201ENST00000313737 1514 ntBASIC20.35■□□□□ 0.85
CTNND1O60716 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 LETM1P2-201ENST00000597330 2178 ntBASIC20.35■□□□□ 0.85
CTNND1O60716 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 AL138781.2-201ENST00000617896 1843 ntBASIC20.34■□□□□ 0.85
CTNND1O60716 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTNND1O60716 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CTNND1O60716 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CTNND1O60716 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.34■□□□□ 0.85
CTNND1O60716 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.34■□□□□ 0.85
CTNND1O60716 AC027612.4-201ENST00000605371 583 ntBASIC20.34■□□□□ 0.85
CTNND1O60716 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.34■□□□□ 0.85
CTNND1O60716 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 AC091812.2-201ENST00000619081 385 ntBASIC20.34■□□□□ 0.85
CTNND1O60716 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.34■□□□□ 0.85
CTNND1O60716 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTNND1O60716 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.34■□□□□ 0.85
CTNND1O60716 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTNND1O60716 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.33■□□□□ 0.85
CTNND1O60716 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CTNND1O60716 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.33■□□□□ 0.85
CTNND1O60716 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.33■□□□□ 0.85
CTNND1O60716 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.33■□□□□ 0.85
CTNND1O60716 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.33■□□□□ 0.85
CTNND1O60716 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.33■□□□□ 0.85
CTNND1O60716 FAM185BP-201ENST00000443595 716 ntBASIC20.33■□□□□ 0.85
CTNND1O60716 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CTNND1O60716 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNND1O60716 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.33■□□□□ 0.85
CTNND1O60716 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNND1O60716 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.33■□□□□ 0.84
CTNND1O60716 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CTNND1O60716 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.33■□□□□ 0.84
CTNND1O60716 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNND1O60716 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.32■□□□□ 0.84
CTNND1O60716 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.32■□□□□ 0.84
CTNND1O60716 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.32■□□□□ 0.84
CTNND1O60716 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CTNND1O60716 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.32■□□□□ 0.84
CTNND1O60716 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.32■□□□□ 0.84
CTNND1O60716 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.32■□□□□ 0.84
CTNND1O60716 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.32■□□□□ 0.84
CTNND1O60716 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.32■□□□□ 0.84
CTNND1O60716 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTNND1O60716 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CTNND1O60716 AC092902.6-201ENST00000641783 218 ntBASIC20.32■□□□□ 0.84
CTNND1O60716 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CTNND1O60716 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTNND1O60716 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms