Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm5538W4VSP6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Gm5538W4VSP6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Gm5538W4VSP6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm5538W4VSP6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Gm5538W4VSP6 Gm44428-201ENSMUST00000204474 874 ntBASIC22.66■■□□□ 1.22
Gm5538W4VSP6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm5538W4VSP6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Gm5538W4VSP6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm5538W4VSP6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Gm5538W4VSP6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.64■■□□□ 1.21
Gm5538W4VSP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Gm5538W4VSP6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm5538W4VSP6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm5538W4VSP6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm5538W4VSP6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Gm5538W4VSP6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm5538W4VSP6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm5538W4VSP6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Gm5538W4VSP6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm5538W4VSP6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm5538W4VSP6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm5538W4VSP6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Gm5538W4VSP6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Gm5538W4VSP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Gm5538W4VSP6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.6■■□□□ 1.21
Gm5538W4VSP6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.6■■□□□ 1.21
Gm5538W4VSP6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm5538W4VSP6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Gm5538W4VSP6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.59■■□□□ 1.21
Gm5538W4VSP6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm5538W4VSP6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Gm5538W4VSP6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm5538W4VSP6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm5538W4VSP6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Gm5538W4VSP6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm5538W4VSP6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm5538W4VSP6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm5538W4VSP6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Gm5538W4VSP6 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.56■■□□□ 1.2
Gm5538W4VSP6 Mir6538-201ENSMUST00000183713 110 ntBASIC22.56■■□□□ 1.2
Gm5538W4VSP6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm5538W4VSP6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm5538W4VSP6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Gm5538W4VSP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm5538W4VSP6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm5538W4VSP6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm5538W4VSP6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Gm5538W4VSP6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm5538W4VSP6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Gm5538W4VSP6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5538W4VSP6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5538W4VSP6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5538W4VSP6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm5538W4VSP6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Gm14523-201ENSMUST00000117260 558 ntBASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Gm5538W4VSP6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Gm5538W4VSP6 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.49■■□□□ 1.19
Gm5538W4VSP6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Gm5538W4VSP6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Gm5538W4VSP6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Gm5538W4VSP6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Gm5538W4VSP6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.48■■□□□ 1.19
Gm5538W4VSP6 Gm12366-201ENSMUST00000121722 873 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms