Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn6Q9Z262 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn6Q9Z262 Gm11687-201ENSMUST00000118911 886 ntBASIC20.7■□□□□ 0.9
Cldn6Q9Z262 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn6Q9Z262 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn6Q9Z262 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn6Q9Z262 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Gm44428-201ENSMUST00000204474 874 ntBASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn6Q9Z262 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn6Q9Z262 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cldn6Q9Z262 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.67■□□□□ 0.9
Cldn6Q9Z262 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn6Q9Z262 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn6Q9Z262 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn6Q9Z262 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn6Q9Z262 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.65■□□□□ 0.9
Cldn6Q9Z262 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn6Q9Z262 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn6Q9Z262 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.65■□□□□ 0.9
Cldn6Q9Z262 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn6Q9Z262 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Cldn6Q9Z262 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cldn6Q9Z262 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Cldn6Q9Z262 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cldn6Q9Z262 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn6Q9Z262 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cldn6Q9Z262 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn6Q9Z262 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cldn6Q9Z262 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn6Q9Z262 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn6Q9Z262 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.61■□□□□ 0.89
Cldn6Q9Z262 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.6■□□□□ 0.89
Cldn6Q9Z262 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.6■□□□□ 0.89
Cldn6Q9Z262 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn6Q9Z262 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn6Q9Z262 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn6Q9Z262 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn6Q9Z262 Gm11175-201ENSMUST00000116172 543 ntBASIC20.58■□□□□ 0.89
Cldn6Q9Z262 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.58■□□□□ 0.89
Cldn6Q9Z262 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cldn6Q9Z262 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn6Q9Z262 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn6Q9Z262 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn6Q9Z262 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn6Q9Z262 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn6Q9Z262 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cldn6Q9Z262 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn6Q9Z262 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn6Q9Z262 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.56■□□□□ 0.88
Cldn6Q9Z262 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn6Q9Z262 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn6Q9Z262 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cldn6Q9Z262 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.54■□□□□ 0.88
Cldn6Q9Z262 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cldn6Q9Z262 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms