Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcf1Q9QZM3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcf1Q9QZM3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Gm10420-201ENSMUST00000121713 882 ntBASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcf1Q9QZM3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clcf1Q9QZM3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcf1Q9QZM3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcf1Q9QZM3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcf1Q9QZM3 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.89■□□□□ 0.77
Clcf1Q9QZM3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.89■□□□□ 0.77
Clcf1Q9QZM3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcf1Q9QZM3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcf1Q9QZM3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcf1Q9QZM3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcf1Q9QZM3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcf1Q9QZM3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcf1Q9QZM3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clcf1Q9QZM3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.86■□□□□ 0.77
Clcf1Q9QZM3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcf1Q9QZM3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcf1Q9QZM3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcf1Q9QZM3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.85■□□□□ 0.77
Clcf1Q9QZM3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcf1Q9QZM3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcf1Q9QZM3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcf1Q9QZM3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clcf1Q9QZM3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clcf1Q9QZM3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
Clcf1Q9QZM3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.83■□□□□ 0.76
Clcf1Q9QZM3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcf1Q9QZM3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcf1Q9QZM3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcf1Q9QZM3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clcf1Q9QZM3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcf1Q9QZM3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcf1Q9QZM3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcf1Q9QZM3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcf1Q9QZM3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.78■□□□□ 0.76
Clcf1Q9QZM3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Clcf1Q9QZM3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clcf1Q9QZM3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcf1Q9QZM3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcf1Q9QZM3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clcf1Q9QZM3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcf1Q9QZM3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcf1Q9QZM3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clcf1Q9QZM3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms