Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■□□□□ 9.1
BCCIPQ9P287 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.4□□□□□ -0.269e-48■□□□□ 9
BCCIPQ9P287 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.411e-8■□□□□ 9
BCCIPQ9P287 LRP5-206ENST00000529993 5103 ntTSL 1 (best)16.99■□□□□ 0.311e-8■□□□□ 9
BCCIPQ9P287 ZNF91-209ENST00000596989 565 ntTSL 311.17□□□□□ -0.622e-6■□□□□ 9
BCCIPQ9P287 ZNF91-212ENST00000599743 662 ntTSL 3 BASIC11.17□□□□□ -0.622e-6■□□□□ 9
BCCIPQ9P287 ZNF91-204ENST00000593341 730 ntTSL 1 (best)10.88□□□□□ -0.672e-6■□□□□ 9
BCCIPQ9P287 ZNF91-208ENST00000596528 2405 ntTSL 210.18□□□□□ -0.782e-6■□□□□ 9
BCCIPQ9P287 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.812e-6■□□□□ 9
BCCIPQ9P287 ZNF91-211ENST00000599281 747 ntTSL 39.13□□□□□ -0.952e-6■□□□□ 9
BCCIPQ9P287 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.61■□□□□ 0.094e-48■□□□□ 8.9
BCCIPQ9P287 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.872e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.742e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.52e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.83■□□□□ 0.282e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.092e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.64□□□□□ -1.352e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.59□□□□□ -1.512e-6■□□□□ 8.8
BCCIPQ9P287 ASXL1-205ENST00000497249 296 ntTSL 54.08□□□□□ -1.762e-6■□□□□ 8.8
BCCIPQ9P287 EML4-208ENST00000482660 584 ntTSL 418.73■□□□□ 0.598e-7■□□□□ 8.7
BCCIPQ9P287 EML4-205ENST00000409040 962 ntTSL 1 (best)18.09■□□□□ 0.498e-7■□□□□ 8.7
BCCIPQ9P287 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.328e-7■□□□□ 8.7
BCCIPQ9P287 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.128e-7■□□□□ 8.7
BCCIPQ9P287 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.628e-7■□□□□ 8.7
BCCIPQ9P287 SNORD3B-1-201ENST00000577988 758 ntBASIC14.24□□□□□ -0.131e-9■□□□□ 8.7
BCCIPQ9P287 SNORD3B-1-203ENST00000631292 217 nt11.2□□□□□ -0.621e-9■□□□□ 8.7
BCCIPQ9P287 SNORD3B-1-202ENST00000617128 218 nt11.11□□□□□ -0.631e-9■□□□□ 8.7
BCCIPQ9P287 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.4□□□□□ -1.711e-24■□□□□ 8.6
BCCIPQ9P287 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.293e-6■□□□□ 8.6
BCCIPQ9P287 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.48■■□□□ 1.033e-6■□□□□ 8.6
BCCIPQ9P287 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.583e-6■□□□□ 8.6
BCCIPQ9P287 SPG7-205ENST00000561945 411 ntTSL 315.35■□□□□ 0.053e-6■□□□□ 8.6
BCCIPQ9P287 SPG7-207ENST00000563218 654 ntTSL 514.11□□□□□ -0.153e-6■□□□□ 8.6
BCCIPQ9P287 ZNF652-203ENST00000508237 4543 ntTSL 214.04□□□□□ -0.163e-6■□□□□ 8.6
BCCIPQ9P287 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.143e-6■□□□□ 8.6
BCCIPQ9P287 RPL22-204ENST00000465387 508 ntTSL 222.38■■□□□ 1.177e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-206ENST00000480661 2279 ntTSL 1 (best)21.43■■□□□ 1.027e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-203ENST00000465335 806 ntTSL 316.51■□□□□ 0.237e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.457e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-202ENST00000462296 600 ntTSL 38.76□□□□□ -1.017e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.96□□□□□ -1.147e-8■□□□□ 8.5
BCCIPQ9P287 RPL22-205ENST00000471204 524 ntTSL 24.73□□□□□ -1.657e-8■□□□□ 8.5
BCCIPQ9P287 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.76■□□□□ 0.913e-13■□□□□ 8.4
BCCIPQ9P287 ASGR1-206ENST00000573596 2083 ntTSL 518.54■□□□□ 0.563e-13■□□□□ 8.4
BCCIPQ9P287 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.043e-13■□□□□ 8.4
BCCIPQ9P287 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.15□□□□□ -0.143e-13■□□□□ 8.4
BCCIPQ9P287 ASGR1-205ENST00000573083 855 ntTSL 310.35□□□□□ -0.753e-13■□□□□ 8.4
Retrieved 47 of 1,347 protein–RNA pairs in 17.5 ms