Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Raet1dQ9JI58 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1dQ9JI58 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1dQ9JI58 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1dQ9JI58 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1dQ9JI58 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Raet1dQ9JI58 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Raet1dQ9JI58 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Raet1dQ9JI58 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1dQ9JI58 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.44■□□□□ 0.86
Raet1dQ9JI58 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1dQ9JI58 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Raet1dQ9JI58 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Raet1dQ9JI58 Mir6538-201ENSMUST00000183713 110 ntBASIC20.43■□□□□ 0.86
Raet1dQ9JI58 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Raet1dQ9JI58 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1dQ9JI58 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1dQ9JI58 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1dQ9JI58 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1dQ9JI58 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Raet1dQ9JI58 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1dQ9JI58 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Raet1dQ9JI58 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Raet1dQ9JI58 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Raet1dQ9JI58 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1dQ9JI58 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1dQ9JI58 Gm27502-201ENSMUST00000183495 199 ntBASIC20.4■□□□□ 0.86
Raet1dQ9JI58 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1dQ9JI58 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Raet1dQ9JI58 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Raet1dQ9JI58 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Raet1dQ9JI58 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.39■□□□□ 0.85
Raet1dQ9JI58 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Raet1dQ9JI58 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.39■□□□□ 0.85
Raet1dQ9JI58 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Raet1dQ9JI58 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Raet1dQ9JI58 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1dQ9JI58 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1dQ9JI58 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.38■□□□□ 0.85
Raet1dQ9JI58 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1dQ9JI58 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1dQ9JI58 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1dQ9JI58 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1dQ9JI58 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1dQ9JI58 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1dQ9JI58 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Raet1dQ9JI58 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1dQ9JI58 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1dQ9JI58 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.33■□□□□ 0.85
Raet1dQ9JI58 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raet1dQ9JI58 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raet1dQ9JI58 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1dQ9JI58 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Gm14523-201ENSMUST00000117260 558 ntBASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1dQ9JI58 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1dQ9JI58 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms