Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf13bQ9ET35 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.43■□□□□ 0.38
Tnfrsf13bQ9ET35 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf13bQ9ET35 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf13bQ9ET35 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf13bQ9ET35 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf13bQ9ET35 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.41■□□□□ 0.38
Tnfrsf13bQ9ET35 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tnfrsf13bQ9ET35 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.41■□□□□ 0.38
Tnfrsf13bQ9ET35 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf13bQ9ET35 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf13bQ9ET35 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf13bQ9ET35 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf13bQ9ET35 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfrsf13bQ9ET35 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf13bQ9ET35 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf13bQ9ET35 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf13bQ9ET35 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.38■□□□□ 0.37
Tnfrsf13bQ9ET35 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.38■□□□□ 0.37
Tnfrsf13bQ9ET35 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tnfrsf13bQ9ET35 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf13bQ9ET35 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf13bQ9ET35 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf13bQ9ET35 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf13bQ9ET35 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf13bQ9ET35 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf13bQ9ET35 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf13bQ9ET35 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf13bQ9ET35 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf13bQ9ET35 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf13bQ9ET35 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf13bQ9ET35 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf13bQ9ET35 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf13bQ9ET35 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Tnfrsf13bQ9ET35 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf13bQ9ET35 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf13bQ9ET35 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf13bQ9ET35 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf13bQ9ET35 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf13bQ9ET35 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf13bQ9ET35 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf13bQ9ET35 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms