Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rtp4Q9ER80 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtp4Q9ER80 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtp4Q9ER80 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtp4Q9ER80 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rtp4Q9ER80 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rtp4Q9ER80 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.64■□□□□ 0.9
Rtp4Q9ER80 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtp4Q9ER80 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtp4Q9ER80 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rtp4Q9ER80 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtp4Q9ER80 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtp4Q9ER80 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtp4Q9ER80 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtp4Q9ER80 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtp4Q9ER80 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtp4Q9ER80 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.59■□□□□ 0.89
Rtp4Q9ER80 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtp4Q9ER80 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rtp4Q9ER80 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Gm10420-201ENSMUST00000121713 882 ntBASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rtp4Q9ER80 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtp4Q9ER80 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtp4Q9ER80 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtp4Q9ER80 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtp4Q9ER80 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtp4Q9ER80 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rtp4Q9ER80 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.56■□□□□ 0.88
Rtp4Q9ER80 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.56■□□□□ 0.88
Rtp4Q9ER80 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp4Q9ER80 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtp4Q9ER80 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rtp4Q9ER80 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms