Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upk1aQ9D132 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk1aQ9D132 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk1aQ9D132 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.04■□□□□ 0.96
Upk1aQ9D132 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk1aQ9D132 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.04■□□□□ 0.96
Upk1aQ9D132 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.04■□□□□ 0.96
Upk1aQ9D132 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.04■□□□□ 0.96
Upk1aQ9D132 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.04■□□□□ 0.96
Upk1aQ9D132 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk1aQ9D132 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.03■□□□□ 0.96
Upk1aQ9D132 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.02■□□□□ 0.96
Upk1aQ9D132 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk1aQ9D132 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Upk1aQ9D132 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.01■□□□□ 0.95
Upk1aQ9D132 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upk1aQ9D132 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upk1aQ9D132 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Upk1aQ9D132 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Upk1aQ9D132 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upk1aQ9D132 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upk1aQ9D132 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21■□□□□ 0.95
Upk1aQ9D132 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upk1aQ9D132 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Upk1aQ9D132 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upk1aQ9D132 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk1aQ9D132 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Upk1aQ9D132 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.99■□□□□ 0.95
Upk1aQ9D132 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk1aQ9D132 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk1aQ9D132 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk1aQ9D132 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Upk1aQ9D132 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Upk1aQ9D132 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk1aQ9D132 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk1aQ9D132 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Upk1aQ9D132 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk1aQ9D132 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk1aQ9D132 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk1aQ9D132 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk1aQ9D132 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Upk1aQ9D132 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk1aQ9D132 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk1aQ9D132 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.92■□□□□ 0.94
Upk1aQ9D132 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk1aQ9D132 Gm6821-201ENSMUST00000107540 542 ntBASIC20.91■□□□□ 0.94
Upk1aQ9D132 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Upk1aQ9D132 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Upk1aQ9D132 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.91■□□□□ 0.94
Upk1aQ9D132 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Upk1aQ9D132 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk1aQ9D132 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk1aQ9D132 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
Upk1aQ9D132 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms