Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl55Q9CZ83 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Mrpl55Q9CZ83 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl55Q9CZ83 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl55Q9CZ83 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mrpl55Q9CZ83 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Gm6311-201ENSMUST00000073790 878 ntBASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Mrpl55Q9CZ83 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl55Q9CZ83 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Mrpl55Q9CZ83 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mrpl55Q9CZ83 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.33□□□□□ -0.12
Mrpl55Q9CZ83 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl55Q9CZ83 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl55Q9CZ83 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl55Q9CZ83 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl55Q9CZ83 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl55Q9CZ83 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 Amer2-203ENSMUST00000225247 2662 ntBASIC14.3□□□□□ -0.12
Mrpl55Q9CZ83 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl55Q9CZ83 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl55Q9CZ83 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl55Q9CZ83 Gm43445-201ENSMUST00000198564 2091 ntBASIC14.27□□□□□ -0.12
Mrpl55Q9CZ83 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl55Q9CZ83 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms