Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc1r1Q9CYQ5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcfc1r1Q9CYQ5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcfc1r1Q9CYQ5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcfc1r1Q9CYQ5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Hcfc1r1Q9CYQ5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcfc1r1Q9CYQ5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.14■□□□□ 0.65
Hcfc1r1Q9CYQ5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcfc1r1Q9CYQ5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.13■□□□□ 0.65
Hcfc1r1Q9CYQ5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc1r1Q9CYQ5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc1r1Q9CYQ5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc1r1Q9CYQ5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcfc1r1Q9CYQ5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hcfc1r1Q9CYQ5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Hcfc1r1Q9CYQ5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcfc1r1Q9CYQ5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hcfc1r1Q9CYQ5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcfc1r1Q9CYQ5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hcfc1r1Q9CYQ5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcfc1r1Q9CYQ5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcfc1r1Q9CYQ5 Nkain2-201ENSMUST00000092602 558 ntBASIC19.1■□□□□ 0.65
Hcfc1r1Q9CYQ5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hcfc1r1Q9CYQ5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.1■□□□□ 0.65
Hcfc1r1Q9CYQ5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcfc1r1Q9CYQ5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcfc1r1Q9CYQ5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcfc1r1Q9CYQ5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.09■□□□□ 0.65
Hcfc1r1Q9CYQ5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcfc1r1Q9CYQ5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcfc1r1Q9CYQ5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcfc1r1Q9CYQ5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcfc1r1Q9CYQ5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc1r1Q9CYQ5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc1r1Q9CYQ5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc1r1Q9CYQ5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc1r1Q9CYQ5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc1r1Q9CYQ5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Hcfc1r1Q9CYQ5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcfc1r1Q9CYQ5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hcfc1r1Q9CYQ5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcfc1r1Q9CYQ5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Hcfc1r1Q9CYQ5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hcfc1r1Q9CYQ5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hcfc1r1Q9CYQ5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.03■□□□□ 0.64
Hcfc1r1Q9CYQ5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc1r1Q9CYQ5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hcfc1r1Q9CYQ5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc1r1Q9CYQ5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Hcfc1r1Q9CYQ5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcfc1r1Q9CYQ5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcfc1r1Q9CYQ5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.97■□□□□ 0.63
Hcfc1r1Q9CYQ5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcfc1r1Q9CYQ5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms