Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn1Q9CWM4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn1Q9CWM4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn1Q9CWM4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn1Q9CWM4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn1Q9CWM4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn1Q9CWM4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn1Q9CWM4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Gm25262-201ENSMUST00000174934 133 ntBASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn1Q9CWM4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn1Q9CWM4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn1Q9CWM4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn1Q9CWM4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn1Q9CWM4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn1Q9CWM4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn1Q9CWM4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn1Q9CWM4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn1Q9CWM4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pfdn1Q9CWM4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn1Q9CWM4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn1Q9CWM4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pfdn1Q9CWM4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn1Q9CWM4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn1Q9CWM4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn1Q9CWM4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn1Q9CWM4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn1Q9CWM4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pfdn1Q9CWM4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn1Q9CWM4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn1Q9CWM4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn1Q9CWM4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn1Q9CWM4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pfdn1Q9CWM4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn1Q9CWM4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pfdn1Q9CWM4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Pfdn1Q9CWM4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.33■□□□□ 0.69
Pfdn1Q9CWM4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms