Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga9Q91XX9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhga9Q91XX9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhga9Q91XX9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhga9Q91XX9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcdhga9Q91XX9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhga9Q91XX9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga9Q91XX9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhga9Q91XX9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhga9Q91XX9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhga9Q91XX9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhga9Q91XX9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhga9Q91XX9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdhga9Q91XX9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhga9Q91XX9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhga9Q91XX9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhga9Q91XX9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.79■■□□□ 1.08
Pcdhga9Q91XX9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhga9Q91XX9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhga9Q91XX9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.78■■□□□ 1.08
Pcdhga9Q91XX9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdhga9Q91XX9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhga9Q91XX9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhga9Q91XX9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga9Q91XX9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdhga9Q91XX9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga9Q91XX9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga9Q91XX9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga9Q91XX9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhga9Q91XX9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga9Q91XX9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga9Q91XX9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga9Q91XX9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga9Q91XX9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga9Q91XX9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga9Q91XX9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga9Q91XX9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga9Q91XX9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhga9Q91XX9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.7■■□□□ 1.06
Pcdhga9Q91XX9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga9Q91XX9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga9Q91XX9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga9Q91XX9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga9Q91XX9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga9Q91XX9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.69■■□□□ 1.06
Pcdhga9Q91XX9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga9Q91XX9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms