Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chrna3Q8R4G9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Chrna3Q8R4G9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chrna3Q8R4G9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chrna3Q8R4G9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chrna3Q8R4G9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.7■■□□□ 1.06
Chrna3Q8R4G9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna3Q8R4G9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna3Q8R4G9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna3Q8R4G9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna3Q8R4G9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna3Q8R4G9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna3Q8R4G9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.66■■□□□ 1.06
Chrna3Q8R4G9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna3Q8R4G9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna3Q8R4G9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna3Q8R4G9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Chrna3Q8R4G9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chrna3Q8R4G9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna3Q8R4G9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chrna3Q8R4G9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna3Q8R4G9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna3Q8R4G9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Chrna3Q8R4G9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna3Q8R4G9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna3Q8R4G9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna3Q8R4G9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna3Q8R4G9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna3Q8R4G9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna3Q8R4G9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chrna3Q8R4G9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chrna3Q8R4G9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chrna3Q8R4G9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Chrna3Q8R4G9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chrna3Q8R4G9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna3Q8R4G9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna3Q8R4G9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.57■■□□□ 1.04
Chrna3Q8R4G9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Chrna3Q8R4G9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna3Q8R4G9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna3Q8R4G9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.55■■□□□ 1.04
Chrna3Q8R4G9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna3Q8R4G9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.54■■□□□ 1.04
Chrna3Q8R4G9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna3Q8R4G9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna3Q8R4G9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chrna3Q8R4G9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms