Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacnb1Q8R3Z5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cacnb1Q8R3Z5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cacnb1Q8R3Z5 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.5■■□□□ 1.51
Cacnb1Q8R3Z5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.5■■□□□ 1.51
Cacnb1Q8R3Z5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cacnb1Q8R3Z5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cacnb1Q8R3Z5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cacnb1Q8R3Z5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cacnb1Q8R3Z5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cacnb1Q8R3Z5 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Gm12366-201ENSMUST00000121722 873 ntBASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 Gm5786-201ENSMUST00000085368 882 ntBASIC24.47■■□□□ 1.51
Cacnb1Q8R3Z5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Cacnb1Q8R3Z5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Cacnb1Q8R3Z5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cacnb1Q8R3Z5 Gm14523-201ENSMUST00000117260 558 ntBASIC24.45■■□□□ 1.5
Cacnb1Q8R3Z5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cacnb1Q8R3Z5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Cacnb1Q8R3Z5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cacnb1Q8R3Z5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cacnb1Q8R3Z5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cacnb1Q8R3Z5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cacnb1Q8R3Z5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cacnb1Q8R3Z5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.42■■□□□ 1.5
Cacnb1Q8R3Z5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacnb1Q8R3Z5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacnb1Q8R3Z5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cacnb1Q8R3Z5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Gm7332-201ENSMUST00000118351 454 ntBASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Cap2-205ENSMUST00000225824 1634 ntBASIC24.41■■□□□ 1.5
Cacnb1Q8R3Z5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cacnb1Q8R3Z5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacnb1Q8R3Z5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacnb1Q8R3Z5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cacnb1Q8R3Z5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cacnb1Q8R3Z5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.39■■□□□ 1.5
Cacnb1Q8R3Z5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.39■■□□□ 1.49
Cacnb1Q8R3Z5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cacnb1Q8R3Z5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cacnb1Q8R3Z5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Cacnb1Q8R3Z5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Cacnb1Q8R3Z5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacnb1Q8R3Z5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cacnb1Q8R3Z5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cacnb1Q8R3Z5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.36■■□□□ 1.49
Cacnb1Q8R3Z5 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.36■■□□□ 1.49
Cacnb1Q8R3Z5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cacnb1Q8R3Z5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cacnb1Q8R3Z5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Cacnb1Q8R3Z5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cacnb1Q8R3Z5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.34■■□□□ 1.49
Cacnb1Q8R3Z5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cacnb1Q8R3Z5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cacnb1Q8R3Z5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cacnb1Q8R3Z5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Cacnb1Q8R3Z5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms