Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Defb35Q8R2I3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.31■■□□□ 1
Defb35Q8R2I3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.3■■□□□ 1
Defb35Q8R2I3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Defb35Q8R2I3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Defb35Q8R2I3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Defb35Q8R2I3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Defb35Q8R2I3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.29■■□□□ 1
Defb35Q8R2I3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Defb35Q8R2I3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Defb35Q8R2I3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Defb35Q8R2I3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.28■■□□□ 1
Defb35Q8R2I3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb35Q8R2I3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb35Q8R2I3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb35Q8R2I3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.27■■□□□ 1
Defb35Q8R2I3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Defb35Q8R2I3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Defb35Q8R2I3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Defb35Q8R2I3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Defb35Q8R2I3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.27■■□□□ 1
Defb35Q8R2I3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Defb35Q8R2I3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Defb35Q8R2I3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Defb35Q8R2I3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Defb35Q8R2I3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Defb35Q8R2I3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Defb35Q8R2I3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Defb35Q8R2I3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.25■□□□□ 0.99
Defb35Q8R2I3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Defb35Q8R2I3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.25■□□□□ 0.99
Defb35Q8R2I3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Defb35Q8R2I3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb35Q8R2I3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb35Q8R2I3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Defb35Q8R2I3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb35Q8R2I3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb35Q8R2I3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Defb35Q8R2I3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.21■□□□□ 0.99
Defb35Q8R2I3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Defb35Q8R2I3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Defb35Q8R2I3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Defb35Q8R2I3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Defb35Q8R2I3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.2■□□□□ 0.98
Defb35Q8R2I3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Defb35Q8R2I3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.2■□□□□ 0.98
Defb35Q8R2I3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Defb35Q8R2I3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Defb35Q8R2I3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defb35Q8R2I3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defb35Q8R2I3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defb35Q8R2I3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Defb35Q8R2I3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defb35Q8R2I3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Defb35Q8R2I3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.17■□□□□ 0.98
Defb35Q8R2I3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Defb35Q8R2I3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Defb35Q8R2I3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Defb35Q8R2I3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Defb35Q8R2I3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Defb35Q8R2I3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Defb35Q8R2I3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Defb35Q8R2I3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Defb35Q8R2I3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Defb35Q8R2I3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Defb35Q8R2I3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Defb35Q8R2I3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Defb35Q8R2I3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Defb35Q8R2I3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Defb35Q8R2I3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Defb35Q8R2I3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Defb35Q8R2I3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Defb35Q8R2I3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Defb35Q8R2I3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Defb35Q8R2I3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.13■□□□□ 0.97
Defb35Q8R2I3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Defb35Q8R2I3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Defb35Q8R2I3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.12■□□□□ 0.97
Defb35Q8R2I3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Defb35Q8R2I3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Defb35Q8R2I3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms