Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.8□□□□□ -0.2
Cystm1Q8K353 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.8□□□□□ -0.2
Cystm1Q8K353 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cystm1Q8K353 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Gm42699-201ENSMUST00000198104 1657 ntBASIC13.79□□□□□ -0.2
Cystm1Q8K353 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Nkain2-201ENSMUST00000092602 558 ntBASIC13.79□□□□□ -0.2
Cystm1Q8K353 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cystm1Q8K353 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cystm1Q8K353 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cystm1Q8K353 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC13.77□□□□□ -0.21
Cystm1Q8K353 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cystm1Q8K353 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cystm1Q8K353 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cystm1Q8K353 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cystm1Q8K353 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC13.75□□□□□ -0.21
Cystm1Q8K353 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cystm1Q8K353 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cystm1Q8K353 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC13.75□□□□□ -0.21
Cystm1Q8K353 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cystm1Q8K353 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cystm1Q8K353 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC13.74□□□□□ -0.21
Cystm1Q8K353 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.74□□□□□ -0.21
Cystm1Q8K353 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cystm1Q8K353 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.74□□□□□ -0.21
Cystm1Q8K353 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cystm1Q8K353 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cystm1Q8K353 Gm4430-201ENSMUST00000192413 1943 ntBASIC13.72□□□□□ -0.21
Cystm1Q8K353 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cystm1Q8K353 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cystm1Q8K353 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cystm1Q8K353 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cystm1Q8K353 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Gm37415-201ENSMUST00000192265 2054 ntBASIC13.7□□□□□ -0.22
Cystm1Q8K353 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.7□□□□□ -0.22
Cystm1Q8K353 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms