Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CroccQ8CJ40 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CroccQ8CJ40 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.27■■□□□ 1
CroccQ8CJ40 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CroccQ8CJ40 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CroccQ8CJ40 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CroccQ8CJ40 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CroccQ8CJ40 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CroccQ8CJ40 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CroccQ8CJ40 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CroccQ8CJ40 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CroccQ8CJ40 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
CroccQ8CJ40 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CroccQ8CJ40 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.24■□□□□ 0.99
CroccQ8CJ40 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.23■□□□□ 0.99
CroccQ8CJ40 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CroccQ8CJ40 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CroccQ8CJ40 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CroccQ8CJ40 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.22■□□□□ 0.99
CroccQ8CJ40 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CroccQ8CJ40 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CroccQ8CJ40 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CroccQ8CJ40 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.22■□□□□ 0.99
CroccQ8CJ40 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CroccQ8CJ40 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CroccQ8CJ40 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CroccQ8CJ40 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CroccQ8CJ40 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CroccQ8CJ40 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CroccQ8CJ40 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CroccQ8CJ40 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CroccQ8CJ40 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CroccQ8CJ40 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CroccQ8CJ40 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.18■□□□□ 0.98
CroccQ8CJ40 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CroccQ8CJ40 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CroccQ8CJ40 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CroccQ8CJ40 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CroccQ8CJ40 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CroccQ8CJ40 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CroccQ8CJ40 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CroccQ8CJ40 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CroccQ8CJ40 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CroccQ8CJ40 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CroccQ8CJ40 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CroccQ8CJ40 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CroccQ8CJ40 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CroccQ8CJ40 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CroccQ8CJ40 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CroccQ8CJ40 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CroccQ8CJ40 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CroccQ8CJ40 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CroccQ8CJ40 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.12■□□□□ 0.97
CroccQ8CJ40 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CroccQ8CJ40 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CroccQ8CJ40 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CroccQ8CJ40 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CroccQ8CJ40 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CroccQ8CJ40 Gm27502-201ENSMUST00000183495 199 ntBASIC21.11■□□□□ 0.97
CroccQ8CJ40 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CroccQ8CJ40 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CroccQ8CJ40 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CroccQ8CJ40 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CroccQ8CJ40 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms