Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pabpc5Q8C7D3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pabpc5Q8C7D3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pabpc5Q8C7D3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Pabpc5Q8C7D3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pabpc5Q8C7D3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pabpc5Q8C7D3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pabpc5Q8C7D3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pabpc5Q8C7D3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pabpc5Q8C7D3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pabpc5Q8C7D3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pabpc5Q8C7D3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pabpc5Q8C7D3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pabpc5Q8C7D3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.95■■□□□ 1.1
Pabpc5Q8C7D3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pabpc5Q8C7D3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pabpc5Q8C7D3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pabpc5Q8C7D3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pabpc5Q8C7D3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pabpc5Q8C7D3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pabpc5Q8C7D3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.9■■□□□ 1.1
Pabpc5Q8C7D3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpc5Q8C7D3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpc5Q8C7D3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpc5Q8C7D3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pabpc5Q8C7D3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pabpc5Q8C7D3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pabpc5Q8C7D3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Pabpc5Q8C7D3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpc5Q8C7D3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pabpc5Q8C7D3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.89■■□□□ 1.09
Pabpc5Q8C7D3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pabpc5Q8C7D3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms