Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf3Q8C120 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3rf3Q8C120 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.04■■□□□ 1.28
Sh3rf3Q8C120 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3rf3Q8C120 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.04■■□□□ 1.28
Sh3rf3Q8C120 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3rf3Q8C120 Gm11687-201ENSMUST00000118911 886 ntBASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf3Q8C120 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Sh3rf3Q8C120 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.01■■□□□ 1.27
Sh3rf3Q8C120 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf3Q8C120 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf3Q8C120 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf3Q8C120 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Sh3rf3Q8C120 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23■■□□□ 1.27
Sh3rf3Q8C120 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3rf3Q8C120 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23■■□□□ 1.27
Sh3rf3Q8C120 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Sh3rf3Q8C120 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3rf3Q8C120 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf3Q8C120 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf3Q8C120 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3rf3Q8C120 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3rf3Q8C120 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Sh3rf3Q8C120 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3rf3Q8C120 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3rf3Q8C120 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.96■■□□□ 1.27
Sh3rf3Q8C120 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3rf3Q8C120 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Sh3rf3Q8C120 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.95■■□□□ 1.26
Sh3rf3Q8C120 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.95■■□□□ 1.26
Sh3rf3Q8C120 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sh3rf3Q8C120 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Sh3rf3Q8C120 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Sh3rf3Q8C120 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf3Q8C120 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf3Q8C120 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf3Q8C120 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3rf3Q8C120 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3rf3Q8C120 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3rf3Q8C120 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3rf3Q8C120 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3rf3Q8C120 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf3Q8C120 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf3Q8C120 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3rf3Q8C120 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Sh3rf3Q8C120 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sh3rf3Q8C120 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sh3rf3Q8C120 Gm27502-201ENSMUST00000183495 199 ntBASIC22.89■■□□□ 1.25
Sh3rf3Q8C120 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Sh3rf3Q8C120 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.89■■□□□ 1.25
Sh3rf3Q8C120 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Sh3rf3Q8C120 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3rf3Q8C120 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms