Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ppp4r4Q8C0Y0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.15■■□□□ 1.14
Ppp4r4Q8C0Y0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp4r4Q8C0Y0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.15■■□□□ 1.14
Ppp4r4Q8C0Y0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ppp4r4Q8C0Y0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ppp4r4Q8C0Y0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp4r4Q8C0Y0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp4r4Q8C0Y0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ppp4r4Q8C0Y0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Cap2-205ENSMUST00000225824 1634 ntBASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp4r4Q8C0Y0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.11■■□□□ 1.13
Ppp4r4Q8C0Y0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppp4r4Q8C0Y0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppp4r4Q8C0Y0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp4r4Q8C0Y0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ppp4r4Q8C0Y0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp4r4Q8C0Y0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp4r4Q8C0Y0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ppp4r4Q8C0Y0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp4r4Q8C0Y0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm12366-201ENSMUST00000121722 873 ntBASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm5786-201ENSMUST00000085368 882 ntBASIC22.08■■□□□ 1.13
Ppp4r4Q8C0Y0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Ppp4r4Q8C0Y0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ppp4r4Q8C0Y0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ppp4r4Q8C0Y0 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp4r4Q8C0Y0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp4r4Q8C0Y0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.05■■□□□ 1.12
Ppp4r4Q8C0Y0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ppp4r4Q8C0Y0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ppp4r4Q8C0Y0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ppp4r4Q8C0Y0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Gm7332-201ENSMUST00000118351 454 ntBASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Ppp4r4Q8C0Y0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 Gm14523-201ENSMUST00000117260 558 ntBASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp4r4Q8C0Y0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.02■■□□□ 1.12
Ppp4r4Q8C0Y0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ppp4r4Q8C0Y0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.02■■□□□ 1.12
Ppp4r4Q8C0Y0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ppp4r4Q8C0Y0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ppp4r4Q8C0Y0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ppp4r4Q8C0Y0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ppp4r4Q8C0Y0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ppp4r4Q8C0Y0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ppp4r4Q8C0Y0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ppp4r4Q8C0Y0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp4r4Q8C0Y0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms