Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.91■□□□□ 0.46
Chd9Q8BYH8 Terc-201ENSMUST00000082862 423 ntBASIC17.91■□□□□ 0.46
Chd9Q8BYH8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd9Q8BYH8 Gm12922-201ENSMUST00000120626 809 ntBASIC17.9■□□□□ 0.46
Chd9Q8BYH8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd9Q8BYH8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.9■□□□□ 0.46
Chd9Q8BYH8 Gm7417-201ENSMUST00000192950 473 ntBASIC17.9■□□□□ 0.46
Chd9Q8BYH8 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.9■□□□□ 0.46
Chd9Q8BYH8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd9Q8BYH8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Chd9Q8BYH8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.89■□□□□ 0.45
Chd9Q8BYH8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd9Q8BYH8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd9Q8BYH8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Amer2-203ENSMUST00000225247 2662 ntBASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd9Q8BYH8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd9Q8BYH8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chd9Q8BYH8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd9Q8BYH8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd9Q8BYH8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.87■□□□□ 0.45
Chd9Q8BYH8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd9Q8BYH8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd9Q8BYH8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chd9Q8BYH8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd9Q8BYH8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd9Q8BYH8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Chd9Q8BYH8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chd9Q8BYH8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd9Q8BYH8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd9Q8BYH8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.84■□□□□ 0.45
Chd9Q8BYH8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd9Q8BYH8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd9Q8BYH8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd9Q8BYH8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd9Q8BYH8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chd9Q8BYH8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.83■□□□□ 0.44
Chd9Q8BYH8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Chd9Q8BYH8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.82■□□□□ 0.44
Chd9Q8BYH8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd9Q8BYH8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd9Q8BYH8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd9Q8BYH8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 Gm44428-201ENSMUST00000204474 874 ntBASIC17.81■□□□□ 0.44
Chd9Q8BYH8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd9Q8BYH8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd9Q8BYH8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd9Q8BYH8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd9Q8BYH8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.79■□□□□ 0.44
Chd9Q8BYH8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
Chd9Q8BYH8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd9Q8BYH8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd9Q8BYH8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chd9Q8BYH8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chd9Q8BYH8 Gm22238-201ENSMUST00000175222 88 ntBASIC17.77■□□□□ 0.44
Chd9Q8BYH8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd9Q8BYH8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.77■□□□□ 0.43
Chd9Q8BYH8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd9Q8BYH8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd9Q8BYH8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms