Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne3Q8BT60 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpne3Q8BT60 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpne3Q8BT60 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpne3Q8BT60 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpne3Q8BT60 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cpne3Q8BT60 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cpne3Q8BT60 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cpne3Q8BT60 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne3Q8BT60 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne3Q8BT60 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne3Q8BT60 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Terc-201ENSMUST00000082862 423 ntBASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne3Q8BT60 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpne3Q8BT60 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpne3Q8BT60 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpne3Q8BT60 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cpne3Q8BT60 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cpne3Q8BT60 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
Cpne3Q8BT60 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cpne3Q8BT60 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cpne3Q8BT60 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne3Q8BT60 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne3Q8BT60 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne3Q8BT60 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.12■□□□□ 0.97
Cpne3Q8BT60 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cpne3Q8BT60 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.11■□□□□ 0.97
Cpne3Q8BT60 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cpne3Q8BT60 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cpne3Q8BT60 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne3Q8BT60 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne3Q8BT60 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne3Q8BT60 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Cpne3Q8BT60 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpne3Q8BT60 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.08■□□□□ 0.96
Cpne3Q8BT60 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.07■□□□□ 0.96
Cpne3Q8BT60 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne3Q8BT60 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne3Q8BT60 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms