Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Zcchc3Q8BPK2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc3Q8BPK2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zcchc3Q8BPK2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc3Q8BPK2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc3Q8BPK2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zcchc3Q8BPK2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.69■□□□□ 0.9
Zcchc3Q8BPK2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc3Q8BPK2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc3Q8BPK2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zcchc3Q8BPK2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Zcchc3Q8BPK2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zcchc3Q8BPK2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.66■□□□□ 0.9
Zcchc3Q8BPK2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc3Q8BPK2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc3Q8BPK2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
Zcchc3Q8BPK2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc3Q8BPK2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zcchc3Q8BPK2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Zcchc3Q8BPK2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zcchc3Q8BPK2 Scarna2-201ENSMUST00000157560 414 ntBASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zcchc3Q8BPK2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Gm9806-201ENSMUST00000051080 552 ntBASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zcchc3Q8BPK2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zcchc3Q8BPK2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zcchc3Q8BPK2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zcchc3Q8BPK2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Zcchc3Q8BPK2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Zcchc3Q8BPK2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc3Q8BPK2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.58■□□□□ 0.89
Zcchc3Q8BPK2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zcchc3Q8BPK2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Zcchc3Q8BPK2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zcchc3Q8BPK2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.57■□□□□ 0.88
Zcchc3Q8BPK2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Zcchc3Q8BPK2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Gm44428-201ENSMUST00000204474 874 ntBASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc3Q8BPK2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms