Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otop1Q80VM9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Otop1Q80VM9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Otop1Q80VM9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.25■□□□□ 0.99
Otop1Q80VM9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Otop1Q80VM9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otop1Q80VM9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Otop1Q80VM9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otop1Q80VM9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Otop1Q80VM9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.24■□□□□ 0.99
Otop1Q80VM9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.24■□□□□ 0.99
Otop1Q80VM9 Gm10232-201ENSMUST00000089221 720 ntBASIC21.24■□□□□ 0.99
Otop1Q80VM9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Otop1Q80VM9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Otop1Q80VM9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Otop1Q80VM9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Otop1Q80VM9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
Otop1Q80VM9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Otop1Q80VM9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Otop1Q80VM9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Otop1Q80VM9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Otop1Q80VM9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Otop1Q80VM9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Otop1Q80VM9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Otop1Q80VM9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Otop1Q80VM9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Otop1Q80VM9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Otop1Q80VM9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Otop1Q80VM9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.17■□□□□ 0.98
Otop1Q80VM9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Otop1Q80VM9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Otop1Q80VM9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Otop1Q80VM9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Otop1Q80VM9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Otop1Q80VM9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Otop1Q80VM9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Otop1Q80VM9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.15■□□□□ 0.98
Otop1Q80VM9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Otop1Q80VM9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Otop1Q80VM9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otop1Q80VM9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Otop1Q80VM9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Otop1Q80VM9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.14■□□□□ 0.97
Otop1Q80VM9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otop1Q80VM9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.14■□□□□ 0.97
Otop1Q80VM9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Otop1Q80VM9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Otop1Q80VM9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Otop1Q80VM9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Otop1Q80VM9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.13■□□□□ 0.97
Otop1Q80VM9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Otop1Q80VM9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.12■□□□□ 0.97
Otop1Q80VM9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otop1Q80VM9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Otop1Q80VM9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.12■□□□□ 0.97
Otop1Q80VM9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.11■□□□□ 0.97
Otop1Q80VM9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Otop1Q80VM9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Otop1Q80VM9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Otop1Q80VM9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otop1Q80VM9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otop1Q80VM9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Otop1Q80VM9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Otop1Q80VM9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Otop1Q80VM9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otop1Q80VM9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Otop1Q80VM9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otop1Q80VM9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Otop1Q80VM9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Otop1Q80VM9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otop1Q80VM9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Otop1Q80VM9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Otop1Q80VM9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms