Protein–RNA interactions for Protein: Q80UB0

Testin-2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q80UB0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q80UB0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Q80UB0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q80UB0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Q80UB0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q80UB0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q80UB0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q80UB0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.54■□□□□ 0.88
Q80UB0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q80UB0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Q80UB0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q80UB0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q80UB0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q80UB0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.53■□□□□ 0.88
Q80UB0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Q80UB0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q80UB0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q80UB0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q80UB0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q80UB0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q80UB0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q80UB0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q80UB0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.51■□□□□ 0.87
Q80UB0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.51■□□□□ 0.87
Q80UB0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q80UB0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q80UB0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Q80UB0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.5■□□□□ 0.87
Q80UB0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.5■□□□□ 0.87
Q80UB0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q80UB0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q80UB0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q80UB0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.49■□□□□ 0.87
Q80UB0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.49■□□□□ 0.87
Q80UB0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q80UB0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q80UB0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q80UB0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q80UB0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.47■□□□□ 0.87
Q80UB0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q80UB0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.47■□□□□ 0.87
Q80UB0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Q80UB0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q80UB0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q80UB0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Q80UB0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q80UB0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.46■□□□□ 0.87
Q80UB0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.46■□□□□ 0.87
Q80UB0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q80UB0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q80UB0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Q80UB0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
Q80UB0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q80UB0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q80UB0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Q80UB0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Q80UB0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.44■□□□□ 0.86
Q80UB0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.44■□□□□ 0.86
Q80UB0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Q80UB0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
Q80UB0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q80UB0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.43■□□□□ 0.86
Q80UB0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q80UB0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q80UB0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q80UB0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q80UB0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Q80UB0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q80UB0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.42■□□□□ 0.86
Q80UB0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Q80UB0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.42■□□□□ 0.86
Q80UB0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q80UB0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Q80UB0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q80UB0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Q80UB0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.41■□□□□ 0.86
Q80UB0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Q80UB0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.41■□□□□ 0.86
Q80UB0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.41■□□□□ 0.86
Q80UB0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.41■□□□□ 0.86
Q80UB0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q80UB0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q80UB0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.4■□□□□ 0.86
Q80UB0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Q80UB0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q80UB0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q80UB0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms