Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
Scube3Q66PY1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.28■■□□□ 1.32
Scube3Q66PY1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scube3Q66PY1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scube3Q66PY1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scube3Q66PY1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
Scube3Q66PY1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Scube3Q66PY1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Scube3Q66PY1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scube3Q66PY1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Scube3Q66PY1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scube3Q66PY1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Scube3Q66PY1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scube3Q66PY1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.25■■□□□ 1.31
Scube3Q66PY1 Gm10420-201ENSMUST00000121713 882 ntBASIC23.25■■□□□ 1.31
Scube3Q66PY1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.25■■□□□ 1.31
Scube3Q66PY1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Scube3Q66PY1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scube3Q66PY1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scube3Q66PY1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.23■■□□□ 1.31
Scube3Q66PY1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Scube3Q66PY1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scube3Q66PY1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.22■■□□□ 1.31
Scube3Q66PY1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Scube3Q66PY1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scube3Q66PY1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scube3Q66PY1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scube3Q66PY1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scube3Q66PY1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Scube3Q66PY1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.21■■□□□ 1.31
Scube3Q66PY1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Scube3Q66PY1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scube3Q66PY1 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.2■■□□□ 1.3
Scube3Q66PY1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Scube3Q66PY1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scube3Q66PY1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scube3Q66PY1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scube3Q66PY1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scube3Q66PY1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scube3Q66PY1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scube3Q66PY1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scube3Q66PY1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.18■■□□□ 1.3
Scube3Q66PY1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scube3Q66PY1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Scube3Q66PY1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.16■■□□□ 1.3
Scube3Q66PY1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scube3Q66PY1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scube3Q66PY1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scube3Q66PY1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.14■■□□□ 1.3
Scube3Q66PY1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scube3Q66PY1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Scube3Q66PY1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Scube3Q66PY1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scube3Q66PY1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scube3Q66PY1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scube3Q66PY1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.13■■□□□ 1.29
Scube3Q66PY1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scube3Q66PY1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scube3Q66PY1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scube3Q66PY1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scube3Q66PY1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scube3Q66PY1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scube3Q66PY1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scube3Q66PY1 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.11■■□□□ 1.29
Scube3Q66PY1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.1■■□□□ 1.29
Scube3Q66PY1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scube3Q66PY1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scube3Q66PY1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scube3Q66PY1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scube3Q66PY1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms