Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav5d-4Q5R1F6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav5d-4Q5R1F6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav5d-4Q5R1F6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5d-4Q5R1F6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav5d-4Q5R1F6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav5d-4Q5R1F6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Trav5d-4Q5R1F6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 Scarna2-201ENSMUST00000157560 414 ntBASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav5d-4Q5R1F6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav5d-4Q5R1F6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5d-4Q5R1F6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5d-4Q5R1F6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav5d-4Q5R1F6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav5d-4Q5R1F6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav5d-4Q5R1F6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Gm9806-201ENSMUST00000051080 552 ntBASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav5d-4Q5R1F6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Gm16437-201ENSMUST00000025669 507 ntBASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav5d-4Q5R1F6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav5d-4Q5R1F6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.83■□□□□ 0.61
Trav5d-4Q5R1F6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav5d-4Q5R1F6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav5d-4Q5R1F6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms