Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12253Q5NC48 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12253Q5NC48 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12253Q5NC48 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12253Q5NC48 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12253Q5NC48 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12253Q5NC48 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm12253Q5NC48 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Gm12253Q5NC48 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm12253Q5NC48 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm12253Q5NC48 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12253Q5NC48 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12253Q5NC48 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Gm12253Q5NC48 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gm12253Q5NC48 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12253Q5NC48 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.04■□□□□ 0.64
Gm12253Q5NC48 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12253Q5NC48 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12253Q5NC48 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12253Q5NC48 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm12253Q5NC48 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.01■□□□□ 0.63
Gm12253Q5NC48 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12253Q5NC48 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12253Q5NC48 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12253Q5NC48 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Gm12253Q5NC48 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm12253Q5NC48 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19■□□□□ 0.63
Gm12253Q5NC48 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gm12253Q5NC48 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19■□□□□ 0.63
Gm12253Q5NC48 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm12253Q5NC48 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12253Q5NC48 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12253Q5NC48 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm12253Q5NC48 Gm15546-201ENSMUST00000122095 826 ntBASIC18.98■□□□□ 0.63
Gm12253Q5NC48 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12253Q5NC48 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12253Q5NC48 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12253Q5NC48 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Gm12253Q5NC48 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Gm12253Q5NC48 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm12253Q5NC48 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm12253Q5NC48 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12253Q5NC48 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12253Q5NC48 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms