Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc106Q3ULM0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.22■□□□□ 0.83
Ccdc106Q3ULM0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccdc106Q3ULM0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc106Q3ULM0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc106Q3ULM0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc106Q3ULM0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.2■□□□□ 0.82
Ccdc106Q3ULM0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc106Q3ULM0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc106Q3ULM0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.2■□□□□ 0.82
Ccdc106Q3ULM0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc106Q3ULM0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc106Q3ULM0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc106Q3ULM0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Ccdc106Q3ULM0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc106Q3ULM0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc106Q3ULM0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc106Q3ULM0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc106Q3ULM0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc106Q3ULM0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc106Q3ULM0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc106Q3ULM0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc106Q3ULM0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccdc106Q3ULM0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc106Q3ULM0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc106Q3ULM0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc106Q3ULM0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc106Q3ULM0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ccdc106Q3ULM0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc106Q3ULM0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc106Q3ULM0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc106Q3ULM0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc106Q3ULM0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc106Q3ULM0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ccdc106Q3ULM0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc106Q3ULM0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc106Q3ULM0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc106Q3ULM0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc106Q3ULM0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc106Q3ULM0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc106Q3ULM0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc106Q3ULM0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc106Q3ULM0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc106Q3ULM0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc106Q3ULM0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.08■□□□□ 0.8
Ccdc106Q3ULM0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc106Q3ULM0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc106Q3ULM0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.07■□□□□ 0.8
Ccdc106Q3ULM0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc106Q3ULM0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms