Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Spg11Q3UHA3 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.25■□□□□ 0.99
Spg11Q3UHA3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Gm27011-201ENSMUST00000182352 972 ntBASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg11Q3UHA3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.23■□□□□ 0.99
Spg11Q3UHA3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Spg11Q3UHA3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.22■□□□□ 0.99
Spg11Q3UHA3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
Spg11Q3UHA3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg11Q3UHA3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.2■□□□□ 0.99
Spg11Q3UHA3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.2■□□□□ 0.99
Spg11Q3UHA3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.19■□□□□ 0.98
Spg11Q3UHA3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.18■□□□□ 0.98
Spg11Q3UHA3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Spg11Q3UHA3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Spg11Q3UHA3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Spg11Q3UHA3 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.14■□□□□ 0.98
Spg11Q3UHA3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Spg11Q3UHA3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Spg11Q3UHA3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Spg11Q3UHA3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Spg11Q3UHA3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Spg11Q3UHA3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Spg11Q3UHA3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.1■□□□□ 0.97
Spg11Q3UHA3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spg11Q3UHA3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Spg11Q3UHA3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Spg11Q3UHA3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Spg11Q3UHA3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms