Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PrkdcP97313 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PrkdcP97313 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PrkdcP97313 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PrkdcP97313 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.83■□□□□ 0.12
PrkdcP97313 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PrkdcP97313 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PrkdcP97313 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PrkdcP97313 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.82■□□□□ 0.12
PrkdcP97313 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.82■□□□□ 0.12
PrkdcP97313 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PrkdcP97313 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.81■□□□□ 0.12
PrkdcP97313 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.81■□□□□ 0.12
PrkdcP97313 Gm12821-201ENSMUST00000120022 600 ntBASIC15.81■□□□□ 0.12
PrkdcP97313 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkdcP97313 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkdcP97313 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.8■□□□□ 0.12
PrkdcP97313 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkdcP97313 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkdcP97313 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkdcP97313 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkdcP97313 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PrkdcP97313 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PrkdcP97313 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PrkdcP97313 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PrkdcP97313 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.79■□□□□ 0.12
PrkdcP97313 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkdcP97313 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.79■□□□□ 0.12
PrkdcP97313 Gm7417-201ENSMUST00000192950 473 ntBASIC15.79■□□□□ 0.12
PrkdcP97313 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PrkdcP97313 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkdcP97313 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkdcP97313 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PrkdcP97313 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.78■□□□□ 0.12
PrkdcP97313 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkdcP97313 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkdcP97313 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkdcP97313 Gm18284-201ENSMUST00000172604 624 ntBASIC15.78■□□□□ 0.12
PrkdcP97313 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkdcP97313 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.77■□□□□ 0.12
PrkdcP97313 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.77■□□□□ 0.12
PrkdcP97313 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PrkdcP97313 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.77■□□□□ 0.11
PrkdcP97313 Gm45417-201ENSMUST00000209533 758 ntBASIC15.77■□□□□ 0.11
PrkdcP97313 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PrkdcP97313 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PrkdcP97313 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PrkdcP97313 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PrkdcP97313 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.76■□□□□ 0.11
PrkdcP97313 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.76■□□□□ 0.11
PrkdcP97313 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PrkdcP97313 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PrkdcP97313 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PrkdcP97313 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PrkdcP97313 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.75■□□□□ 0.11
PrkdcP97313 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.75■□□□□ 0.11
PrkdcP97313 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PrkdcP97313 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PrkdcP97313 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.75■□□□□ 0.11
PrkdcP97313 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PrkdcP97313 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PrkdcP97313 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PrkdcP97313 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.74■□□□□ 0.11
PrkdcP97313 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PrkdcP97313 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.73■□□□□ 0.11
PrkdcP97313 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PrkdcP97313 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PrkdcP97313 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PrkdcP97313 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.73■□□□□ 0.11
PrkdcP97313 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.73■□□□□ 0.11
PrkdcP97313 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.72■□□□□ 0.11
PrkdcP97313 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PrkdcP97313 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PrkdcP97313 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PrkdcP97313 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PrkdcP97313 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PrkdcP97313 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.71■□□□□ 0.11
PrkdcP97313 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PrkdcP97313 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.71■□□□□ 0.11
PrkdcP97313 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PrkdcP97313 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.71■□□□□ 0.11
PrkdcP97313 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PrkdcP97313 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PrkdcP97313 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PrkdcP97313 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.7■□□□□ 0.1
PrkdcP97313 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PrkdcP97313 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PrkdcP97313 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PrkdcP97313 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.69■□□□□ 0.1
PrkdcP97313 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PrkdcP97313 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PrkdcP97313 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PrkdcP97313 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PrkdcP97313 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PrkdcP97313 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PrkdcP97313 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PrkdcP97313 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PrkdcP97313 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PrkdcP97313 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PrkdcP97313 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms