Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3f3aP84244 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H3f3aP84244 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3aP84244 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.69■□□□□ 0.74
H3f3aP84244 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3aP84244 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3aP84244 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3aP84244 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.68■□□□□ 0.74
H3f3aP84244 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
H3f3aP84244 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3aP84244 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3f3aP84244 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H3f3aP84244 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.67■□□□□ 0.74
H3f3aP84244 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.67■□□□□ 0.74
H3f3aP84244 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
H3f3aP84244 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
H3f3aP84244 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3aP84244 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3aP84244 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3aP84244 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
H3f3aP84244 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3aP84244 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3aP84244 Cap2-205ENSMUST00000225824 1634 ntBASIC19.65■□□□□ 0.74
H3f3aP84244 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Gm7332-201ENSMUST00000118351 454 ntBASIC19.65■□□□□ 0.74
H3f3aP84244 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.65■□□□□ 0.74
H3f3aP84244 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
H3f3aP84244 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3aP84244 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.64■□□□□ 0.74
H3f3aP84244 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H3f3aP84244 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
H3f3aP84244 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H3f3aP84244 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
H3f3aP84244 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3aP84244 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3aP84244 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.63■□□□□ 0.73
H3f3aP84244 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.63■□□□□ 0.73
H3f3aP84244 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.63■□□□□ 0.73
H3f3aP84244 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H3f3aP84244 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H3f3aP84244 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3aP84244 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3aP84244 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3aP84244 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
H3f3aP84244 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3aP84244 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3aP84244 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
H3f3aP84244 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3aP84244 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.61■□□□□ 0.73
H3f3aP84244 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.61■□□□□ 0.73
H3f3aP84244 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.61■□□□□ 0.73
H3f3aP84244 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
H3f3aP84244 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
H3f3aP84244 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3aP84244 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.61■□□□□ 0.73
H3f3aP84244 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
H3f3aP84244 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3aP84244 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3aP84244 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3aP84244 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.6■□□□□ 0.73
H3f3aP84244 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3aP84244 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3aP84244 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3aP84244 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.59■□□□□ 0.73
H3f3aP84244 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3aP84244 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
H3f3aP84244 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.59■□□□□ 0.73
H3f3aP84244 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3aP84244 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3aP84244 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H3f3aP84244 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H3f3aP84244 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.58■□□□□ 0.72
H3f3aP84244 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3f3aP84244 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
H3f3aP84244 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3aP84244 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3aP84244 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3aP84244 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
H3f3aP84244 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3aP84244 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3aP84244 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms