Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gbx1P82976 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Gbx1P82976 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gbx1P82976 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Gbx1P82976 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gbx1P82976 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gbx1P82976 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gbx1P82976 Terc-201ENSMUST00000082862 423 ntBASIC20.76■□□□□ 0.91
Gbx1P82976 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gbx1P82976 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gbx1P82976 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gbx1P82976 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
Gbx1P82976 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gbx1P82976 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Gbx1P82976 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.74■□□□□ 0.91
Gbx1P82976 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Gbx1P82976 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gbx1P82976 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gbx1P82976 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gbx1P82976 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gbx1P82976 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gbx1P82976 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gbx1P82976 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gbx1P82976 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gbx1P82976 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gbx1P82976 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gbx1P82976 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gbx1P82976 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Gbx1P82976 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gbx1P82976 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gbx1P82976 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gbx1P82976 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.68■□□□□ 0.9
Gbx1P82976 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gbx1P82976 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gbx1P82976 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gbx1P82976 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.68■□□□□ 0.9
Gbx1P82976 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gbx1P82976 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gbx1P82976 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.67■□□□□ 0.9
Gbx1P82976 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.67■□□□□ 0.9
Gbx1P82976 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gbx1P82976 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gbx1P82976 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gbx1P82976 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.67■□□□□ 0.9
Gbx1P82976 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gbx1P82976 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.66■□□□□ 0.9
Gbx1P82976 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gbx1P82976 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gbx1P82976 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gbx1P82976 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gbx1P82976 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gbx1P82976 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.65■□□□□ 0.9
Gbx1P82976 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.65■□□□□ 0.9
Gbx1P82976 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gbx1P82976 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gbx1P82976 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gbx1P82976 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.64■□□□□ 0.89
Gbx1P82976 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gbx1P82976 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gbx1P82976 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbx1P82976 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbx1P82976 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gbx1P82976 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbx1P82976 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gbx1P82976 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.62■□□□□ 0.89
Gbx1P82976 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbx1P82976 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gbx1P82976 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbx1P82976 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gbx1P82976 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.61■□□□□ 0.89
Gbx1P82976 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gbx1P82976 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gbx1P82976 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gbx1P82976 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbx1P82976 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbx1P82976 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gbx1P82976 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.6■□□□□ 0.89
Gbx1P82976 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbx1P82976 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbx1P82976 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gbx1P82976 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.59■□□□□ 0.89
Gbx1P82976 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms