Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.6■□□□□ 0.09
Cks1bP61025 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cks1bP61025 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1bP61025 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cks1bP61025 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1bP61025 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1bP61025 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1bP61025 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1bP61025 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.58■□□□□ 0.09
Cks1bP61025 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cks1bP61025 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cks1bP61025 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cks1bP61025 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1bP61025 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Cks1bP61025 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.58■□□□□ 0.08
Cks1bP61025 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cks1bP61025 Iqck-206ENSMUST00000208658 2891 ntBASIC15.58■□□□□ 0.08
Cks1bP61025 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cks1bP61025 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cks1bP61025 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1bP61025 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1bP61025 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1bP61025 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1bP61025 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1bP61025 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.57■□□□□ 0.08
Cks1bP61025 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1bP61025 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1bP61025 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1bP61025 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cks1bP61025 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cks1bP61025 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.56■□□□□ 0.08
Cks1bP61025 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1bP61025 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1bP61025 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Cks1bP61025 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1bP61025 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1bP61025 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cks1bP61025 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cks1bP61025 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1bP61025 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Cks1bP61025 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1bP61025 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cks1bP61025 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cks1bP61025 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cks1bP61025 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1bP61025 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1bP61025 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cks1bP61025 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cks1bP61025 Zfp131-205ENSMUST00000223812 663 ntBASIC15.52■□□□□ 0.08
Cks1bP61025 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.52■□□□□ 0.08
Cks1bP61025 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.52■□□□□ 0.07
Cks1bP61025 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.52■□□□□ 0.07
Cks1bP61025 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.52■□□□□ 0.07
Cks1bP61025 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cks1bP61025 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.51■□□□□ 0.07
Cks1bP61025 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.51■□□□□ 0.07
Cks1bP61025 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cks1bP61025 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Cks1bP61025 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cks1bP61025 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Cks1bP61025 Particl-201ENSMUST00000205370 1560 ntBASIC15.49■□□□□ 0.07
Cks1bP61025 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1bP61025 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1bP61025 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cks1bP61025 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1bP61025 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cks1bP61025 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cks1bP61025 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.48■□□□□ 0.07
Cks1bP61025 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms