Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Gm7432-201ENSMUST00000210343 879 ntBASIC18.66■□□□□ 0.58
Srp9P49962 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Srp9P49962 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srp9P49962 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srp9P49962 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srp9P49962 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Srp9P49962 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.65■□□□□ 0.58
Srp9P49962 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srp9P49962 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.64■□□□□ 0.57
Srp9P49962 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srp9P49962 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Srp9P49962 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srp9P49962 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Srp9P49962 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.62■□□□□ 0.57
Srp9P49962 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.62■□□□□ 0.57
Srp9P49962 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Srp9P49962 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srp9P49962 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srp9P49962 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srp9P49962 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srp9P49962 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srp9P49962 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srp9P49962 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.61■□□□□ 0.57
Srp9P49962 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srp9P49962 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srp9P49962 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.6■□□□□ 0.57
Srp9P49962 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srp9P49962 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srp9P49962 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srp9P49962 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srp9P49962 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Srp9P49962 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.59■□□□□ 0.57
Srp9P49962 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srp9P49962 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srp9P49962 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Srp9P49962 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srp9P49962 Gm11599-201ENSMUST00000118720 878 ntBASIC18.58■□□□□ 0.56
Srp9P49962 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srp9P49962 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srp9P49962 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Srp9P49962 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Srp9P49962 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
Srp9P49962 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srp9P49962 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp9P49962 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp9P49962 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp9P49962 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Srp9P49962 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Srp9P49962 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.56■□□□□ 0.56
Srp9P49962 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srp9P49962 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srp9P49962 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.55■□□□□ 0.56
Srp9P49962 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp9P49962 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srp9P49962 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.54■□□□□ 0.56
Srp9P49962 Gm4799-201ENSMUST00000095396 657 ntBASIC18.54■□□□□ 0.56
Srp9P49962 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp9P49962 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Srp9P49962 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srp9P49962 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srp9P49962 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms