Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfbP31240 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PdgfbP31240 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.72■■□□□ 1.23
PdgfbP31240 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.7■■□□□ 1.23
PdgfbP31240 Gm21956-201ENSMUST00000179946 522 ntBASIC22.7■■□□□ 1.22
PdgfbP31240 Gm7417-201ENSMUST00000192950 473 ntBASIC22.7■■□□□ 1.22
PdgfbP31240 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PdgfbP31240 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.68■■□□□ 1.22
PdgfbP31240 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfbP31240 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfbP31240 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.67■■□□□ 1.22
PdgfbP31240 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfbP31240 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.66■■□□□ 1.22
PdgfbP31240 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PdgfbP31240 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.66■■□□□ 1.22
PdgfbP31240 Amer2-203ENSMUST00000225247 2662 ntBASIC22.66■■□□□ 1.22
PdgfbP31240 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PdgfbP31240 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.65■■□□□ 1.22
PdgfbP31240 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.64■■□□□ 1.22
PdgfbP31240 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PdgfbP31240 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.64■■□□□ 1.21
PdgfbP31240 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.64■■□□□ 1.21
PdgfbP31240 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.63■■□□□ 1.21
PdgfbP31240 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.63■■□□□ 1.21
PdgfbP31240 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.63■■□□□ 1.21
PdgfbP31240 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm9847-201ENSMUST00000052528 599 ntBASIC22.63■■□□□ 1.21
PdgfbP31240 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.62■■□□□ 1.21
PdgfbP31240 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PdgfbP31240 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.61■■□□□ 1.21
PdgfbP31240 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PdgfbP31240 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PdgfbP31240 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.61■■□□□ 1.21
PdgfbP31240 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PdgfbP31240 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.59■■□□□ 1.21
PdgfbP31240 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PdgfbP31240 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.58■■□□□ 1.21
PdgfbP31240 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PdgfbP31240 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
PdgfbP31240 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PdgfbP31240 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.56■■□□□ 1.2
PdgfbP31240 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PdgfbP31240 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
PdgfbP31240 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Gm22238-201ENSMUST00000175222 88 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.55■■□□□ 1.2
PdgfbP31240 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.54■■□□□ 1.2
PdgfbP31240 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.54■■□□□ 1.2
PdgfbP31240 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.52■■□□□ 1.2
PdgfbP31240 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PdgfbP31240 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.51■■□□□ 1.19
PdgfbP31240 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms